Documenting the trajectories of ecological communities following a disturbance represents one of the five core research themes central to LTER network science. Quantifying degrees of resilience, here defined as the time needed for a community to return to a previous steady or quasi-steady state following a disturbance, can be especially challenging when ecosystems experience multiple perturbations that, in combination, can cause complex, non-linear community responses.

The MIRADA project was launched in the fall of 2007 to establish a Microbial Biodiversity Survey and Inventory across all 13 of the major aquatic (marine and freshwater) Long Term Ecological Research (LTER) sites in the NSF US LTER Program. The long-term objective of our study is to document and describe baseline diversity and relative abundance data for both common and rare members of microbial communities and to relate this diversity to the underlying physical and chemical environment.

The exchange of water between coral reef lagoons and the open ocean depends on the interplay between waves, buoyancy, wind stress, and alongshore currents. Some processes act to retain lagoon water such as onshore flows driven by surface waves, while others (e.g., the momentum jet that exits the lagoon) export lagoon water. To explore the impact of surface waves on the exchange dynamics, observations were made in Paopao Bay, French Polynesia, a nearly tideless coral reef lagoon system.

Coral reefs are known for their exceptional species diversity and productivity, yet are sensitive to biotic and abiotic perturbations. Many reefs have experienced phase shifts as the result of alterations in herbivore abundance. This research in Moorea, French Polynesia, is aimed at elucidating differential effects of sea urchin species on the coral reef community.

Hermatypic corals form the foundation of most coral reef ecosystems and provide critical habitat for hundreds of species of coral associated fishes. Recent decades have seen a decline in the abundance and areal cover of branching Acroporid corals along the north shore of Moorea, French Polynesia.

Herbivory plays a crucial role in structuring coral reef communities. A decrease in abundance of herbivores increases the probability of state shift from coral to algae domination. Although both fish and sea urchins are important herbivores, many tropical reef systems have suffered from over-harvesting of fishes and therefore, a more thorough understanding the effect of urchins on community structure is essential. This study examines how population dynamics of the urchin Diadema savignyi, affect the reef community of Moorea, French Polynesia. D.

This study was conducted as part of a larger effort to look at potential indirect effects of cleaner fish on coral reefs. Cleaners are likely to have indirect effects on the reefs they occupy because they attract and concentrate a wide variety of different client fish to their territories. While client fish visit cleaner stations in order to have ectoparasites removed by the cleaner, they are also involved in other activities (such as feeding) during their visits, and these activities can affect the fish, algae, corals, and other invertebrates that inhabit cleaner stations.

Ocean acidification has severe implications for marine ecosystems. Tropical coral reef communities are particularly vulnerable as they are dominated by marine calcifiers such as corals and crustose coralline algae (CCA). CCA are a fundamental component of reef communities in that they cement reef fragments together, provide critical settlement cues for coral larvae, build reef caps (algal ridges), and are a source of primary production. Despite the key role of CCA in tropical communities, little is known about species- specific physiological responses to ocean acidification.

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Fish predation is an important disturbance affecting corals, yet few studies have compared the response of multiple coral species to one or more modes of fish predation. The present study differs from previous work on this topic by utilizing short-term field experiments, and testing the effects of corallivory on life stages (i.e., small or juvenile colonies) that are thought to be sensitive with regards to the effects of damage, and which play important roles in population growth.